Automatic merge from submit-queue (batch tested with PRs 42942, 42935)
[Bug] Handle container restarts and avoid using runtime pod cache while allocating GPUs
Fixes#42412
**Background**
Support for multiple GPUs is an experimental feature in v1.6.
Container restarts were handled incorrectly which resulted in stranding of GPUs
Kubelet is incorrectly using runtime cache to track running pods which can result in race conditions (as it did in other parts of kubelet). This can result in same GPU being assigned to multiple pods.
**What does this PR do**
This PR tracks assignment of GPUs to containers and returns pre-allocated GPUs instead of (incorrectly) allocating new GPUs.
GPU manager is updated to consume a list of active pods derived from apiserver cache instead of runtime cache.
Node e2e has been extended to validate this failure scenario.
**Risk**
Minimal/None since support for GPUs is an experimental feature that is turned off by default. The code is also isolated to GPU manager in kubelet.
**Workarounds**
In the absence of this PR, users can mitigate the original issue by setting `RestartPolicyNever` in their pods.
There is no workaround for the race condition caused by using the runtime cache though.
Hence it is worth including this fix in v1.6.0.
cc @jianzhangbjz @seelam @kubernetes/sig-node-pr-reviews
Replaces #42560
Automatic merge from submit-queue
Invalid environment var names are reported and pod starts
When processing EnvFrom items, all invalid keys are collected and
reported as a single event.
The Pod is allowed to start.
fixes#42583
Automatic merge from submit-queue (batch tested with PRs 42734, 42745, 42758, 42814, 42694)
Dropped docker 1.9.x support. Changed the minimumDockerAPIVersion to
1.22
cc/ @Random-Liu @yujuhong
We talked about dropping docker 1.9.x support for a while. I just realized that we haven't really done it yet.
```release-note
Dropped the support for docker 1.9.x and the belows.
```
Automatic merge from submit-queue
dockershim: Fix the race condition in ListPodSandbox
In ListPodSandbox(), we
1. List all sandbox docker containers
2. List all sandbox checkpoints. If the checkpoint does not have a
corresponding container in (1), we return partial result based on
the checkpoint.
The problem is that new PodSandboxes can be created between step (1) and
(2). In those cases, we will see the checkpoints, but not the sandbox
containers. This leads to strange behavior because the partial result
from the checkpoint does not include some critical information. For
example, the creation timestamp'd be zero, and that would cause kubelet's
garbage collector to immediately remove the sandbox.
This change fixes that by getting the list of checkpoints before listing
all the containers (since in RunPodSandbox we create them in the reverse
order).
Automatic merge from submit-queue (batch tested with PRs 42211, 38691, 42737, 42757, 42754)
Only create the symlink when container log path exists
When using `syslog` logging driver instead of `json-file`, there will not be container log files such as `<containerID-json.log>`. We should not create symlink in this case.
In ListPodSandbox(), we
1. List all sandbox docker containers
2. List all sandbox checkpoints. If the checkpoint does not have a
corresponding container in (1), we return partial result based on
the checkpoint.
The problem is that new PodSandboxes can be created between step (1) and
(2). In those cases, we will see the checkpoints, but not the sandbox
containers. This leads to strange behavior because the partial result
from the checkpoint does not include some critical information. For
example, the creation timestamp'd be zero, and that would cause kubelet's
garbage collector to immediately remove the sandbox.
This change fixes that by getting the list of checkpoints before listing
all the containers (since in RunPodSandbox we create them in the reverse
order).
Automatic merge from submit-queue (batch tested with PRs 42692, 42169, 42173)
Add pprof trace support
Add support for `/debug/pprof/trace`
Can wait for master to reopen for 1.7.
cc @smarterclayton @wojtek-t @gmarek @timothysc @jeremyeder @kubernetes/sig-scalability-pr-reviews
* Properly return ImageNotFoundError
* Support inject "Images" or "ImageInspects" and keep both in sync.
* Remove the FakeDockerPuller and let FakeDockerClient subsumes its
functinality. This reduces the overhead to maintain both objects.
* Various small fixes and refactoring of the testing utils.
Automatic merge from submit-queue (batch tested with PRs 41890, 42593, 42633, 42626, 42609)
Pods pending due to insufficient OIR should get scheduled once sufficient OIR becomes available (e2e disabled).
#41870 was reverted because it introduced an e2e test flake. This is the same code with the e2e for OIR disabled again.
We can attempt to enable the e2e test cases one-by-one in follow-up PRs, but it would be preferable to get the main fix merged in time for 1.6 since OIR is broken on master (see #41861).
cc @timothysc
Automatic merge from submit-queue (batch tested with PRs 42506, 42585, 42596, 42584)
provide active pods to cgroup cleanup
**What this PR does / why we need it**:
This PR provides more information for when a pod cgroup is considered orphaned. The running pods cache is based on the runtime's view of the world. we create pod cgroups before containers so we should just be looking at activePods.
**Which issue this PR fixes**
Fixes https://github.com/kubernetes/kubernetes/issues/42431
Automatic merge from submit-queue
cgroup names created by kubelet should be lowercased
**What this PR does / why we need it**:
This PR modifies the kubelet to create cgroupfs names that are lowercased. This better aligns us with the naming convention for cgroups v2 and other cgroup managers in ecosystem (docker, systemd, etc.)
See: https://www.kernel.org/doc/Documentation/cgroup-v2.txt
"2-6-2. Avoid Name Collisions"
**Special notes for your reviewer**:
none
**Release note**:
```release-note
kubelet created cgroups follow lowercase naming conventions
```
Automatic merge from submit-queue (batch tested with PRs 31783, 41988, 42535, 42572, 41870)
Pods pending due to insufficient OIR should get scheduled once sufficient OIR becomes available.
This appears to be a regression since v1.5.0 in scheduler behavior for opaque integer resources, reported in https://github.com/kubernetes/kubernetes/issues/41861.
- [X] Add failing e2e test to trigger the regression
- [x] Restore previous behavior (pods pending due to insufficient OIR get scheduled once sufficient OIR becomes available.)
Automatic merge from submit-queue
[Bug] Fix gpu initialization in Kubelet
Kubelet incorrectly fails if `AllAlpha=true` feature gate is enabled with container runtimes that are not `docker`.
Replaces #42407
- Added schedulercache.Resource.SetOpaque helper.
- Amend kubelet allocatable sync so that when OIRs are removed from capacity
they are also removed from allocatable.
- Fixes#41861.
Automatic merge from submit-queue (batch tested with PRs 42369, 42375, 42397, 42435, 42455)
[Bug Fix]: Avoid evicting more pods than necessary by adding Timestamps for fsstats and ignoring stale stats
Continuation of #33121. Credit for most of this goes to @sjenning. I added volume fs timestamps.
**why is this a bug**
This PR attempts to fix part of https://github.com/kubernetes/kubernetes/issues/31362 which results in multiple pods getting evicted unnecessarily whenever the node runs into resource pressure. This PR reduces the chances of such disruptions by avoiding reacting to old/stale metrics.
Without this PR, kubernetes nodes under resource pressure will cause unnecessary disruptions to user workloads.
This PR will also help deflake a node e2e test suite.
The eviction manager currently avoids evicting pods if metrics are old. However, timestamp data is not available for filesystem data, and this causes lots of extra evictions.
See the [inode eviction test flakes](https://k8s-testgrid.appspot.com/google-node#kubelet-flaky-gce-e2e) for examples.
This should probably be treated as a bugfix, as it should help mitigate extra evictions.
cc: @kubernetes/sig-storage-pr-reviews @kubernetes/sig-node-pr-reviews @vishh @derekwaynecarr @sjenning
Automatic merge from submit-queue (batch tested with PRs 42369, 42375, 42397, 42435, 42455)
Kubelet: return container runtime's version instead of CRI's one
**What this PR does / why we need it**:
With CRI enabled by default, kubelet reports the version of CRI instead of container runtime version. This PR fixes this problem.
**Which issue this PR fixes**
Fixes#42396.
**Special notes for your reviewer**:
Should also cherry-pick to 1.6 branch.
**Release note**:
```release-note
NONE
```
cc @yujuhong @kubernetes/sig-node-bugs
Automatic merge from submit-queue
Eviction Manager Enforces Allocatable Thresholds
This PR modifies the eviction manager to enforce node allocatable thresholds for memory as described in kubernetes/community#348.
This PR should be merged after #41234.
cc @kubernetes/sig-node-pr-reviews @kubernetes/sig-node-feature-requests @vishh
** Why is this a bug/regression**
Kubelet uses `oom_score_adj` to enforce QoS policies. But the `oom_score_adj` is based on overall memory requested, which means that a Burstable pod that requested a lot of memory can lead to OOM kills for Guaranteed pods, which violates QoS. Even worse, we have observed system daemons like kubelet or kube-proxy being killed by the OOM killer.
Without this PR, v1.6 will have node stability issues and regressions in an existing GA feature `out of Resource` handling.
Automatic merge from submit-queue (batch tested with PRs 41919, 41149, 42350, 42351, 42285)
kubelet: enable qos-level memory limits
```release-note
Experimental support to reserve a pod's memory request from being utilized by pods in lower QoS tiers.
```
Enables the QoS-level memory cgroup limits described in https://github.com/kubernetes/community/pull/314
**Note: QoS level cgroups have to be enabled for any of this to take effect.**
Adds a new `--experimental-qos-reserved` flag that can be used to set the percentage of a resource to be reserved at the QoS level for pod resource requests.
For example, `--experimental-qos-reserved="memory=50%`, means that if a Guaranteed pod sets a memory request of 2Gi, the Burstable and BestEffort QoS memory cgroups will have their `memory.limit_in_bytes` set to `NodeAllocatable - (2Gi*50%)` to reserve 50% of the guaranteed pod's request from being used by the lower QoS tiers.
If a Burstable pod sets a request, its reserve will be deducted from the BestEffort memory limit.
The result is that:
- Guaranteed limit matches root cgroup at is not set by this code
- Burstable limit is `NodeAllocatable - Guaranteed reserve`
- BestEffort limit is `NodeAllocatable - Guaranteed reserve - Burstable reserve`
The only resource currently supported is `memory`; however, the code is generic enough that other resources can be added in the future.
@derekwaynecarr @vishh
Automatic merge from submit-queue (batch tested with PRs 41672, 42084, 42233, 42165, 42273)
ExecProbes should be able to do simple env var substitution
For containers that don't have bash, we should support env substitution
like we do on command and args. However, without major refactoring
valueFrom is not supportable from inside the prober. For now, implement
substitution based on hardcoded env and leave TODOs for future work.
Improves the state of #40846, will spawn a follow up issue for future refactoring after CRI settles down
Automatic merge from submit-queue (batch tested with PRs 41980, 42192, 42223, 41822, 42048)
CRI: Make dockershim better implements CRI.
When thinking about CRI Validation test, I found that `PodSandboxStatus.Linux.Namespaces.Options.HostPid` and `PodSandboxStatus.Linux.Namespaces.Options.HostIpc` are not populated. Although they are not used by kuberuntime now, we should populate them to conform to CRI.
/cc @yujuhong @feiskyer
Automatic merge from submit-queue (batch tested with PRs 41931, 39821, 41841, 42197, 42195)
Use `docker logs` directly if the docker logging driver is not `json-file`
Fixes https://github.com/kubernetes/kubernetes/issues/41996.
Post the PR first, I still need to manually test this, because we don't have test coverage for journald logging pluggin.
@yujuhong @dchen1107
/cc @kubernetes/sig-node-pr-reviews
